Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS2Q99743 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS2Q99743 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS2Q99743 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS2Q99743 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS2Q99743 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS2Q99743 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS2Q99743 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NPAS2Q99743 AL353692.3-201ENST00000407031 1396 ntBASIC16.87■□□□□ 0.29
NPAS2Q99743 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 AL162727.3-201ENST00000635661 2787 ntBASIC16.87■□□□□ 0.29
NPAS2Q99743 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS2Q99743 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NPAS2Q99743 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPAS2Q99743 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 LINC00265-3P-201ENST00000447588 903 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS2Q99743 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC090616.6-201ENST00000582640 721 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 IGHV3-41-201ENST00000613121 348 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 AC004263.2-201ENST00000617183 678 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.86■□□□□ 0.29
NPAS2Q99743 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS2Q99743 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC092171.3-201ENST00000610122 2651 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS2Q99743 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NPAS2Q99743 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC092053.1-201ENST00000605787 1936 ntBASIC16.86■□□□□ 0.29
NPAS2Q99743 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS2Q99743 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 KRT18P65-201ENST00000439811 1286 ntBASIC16.85■□□□□ 0.29
NPAS2Q99743 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 AP000867.3-201ENST00000524675 377 ntBASIC16.85■□□□□ 0.29
NPAS2Q99743 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS2Q99743 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 AL592071.1-201ENST00000611956 408 ntBASIC16.85■□□□□ 0.29
NPAS2Q99743 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NPAS2Q99743 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
NPAS2Q99743 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS2Q99743 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS2Q99743 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS2Q99743 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
NPAS2Q99743 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms