Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.83■□□□□ 0.93
CNKSR1Q969H4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.83■□□□□ 0.93
CNKSR1Q969H4 RARRES2P9-201ENST00000565168 469 ntBASIC20.83■□□□□ 0.93
CNKSR1Q969H4 AL138918.1-201ENST00000568306 659 ntBASIC20.83■□□□□ 0.93
CNKSR1Q969H4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.83■□□□□ 0.93
CNKSR1Q969H4 SPDYE12P-201ENST00000618416 771 ntBASIC20.83■□□□□ 0.93
CNKSR1Q969H4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNKSR1Q969H4 LYSMD4-203ENST00000378904 2122 ntBASIC20.83■□□□□ 0.92
CNKSR1Q969H4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 AC003101.2-201ENST00000612557 442 ntBASIC20.82■□□□□ 0.92
CNKSR1Q969H4 AL138828.2-201ENST00000615812 383 ntBASIC20.82■□□□□ 0.92
CNKSR1Q969H4 AP001350.2-201ENST00000625104 1094 ntBASIC20.82■□□□□ 0.92
CNKSR1Q969H4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 SLC22A20-204ENST00000530038 1673 ntBASIC20.82■□□□□ 0.92
CNKSR1Q969H4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNKSR1Q969H4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 AC142381.1-201ENST00000426099 345 ntBASIC20.81■□□□□ 0.92
CNKSR1Q969H4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 AC007967.4-201ENST00000614700 386 ntBASIC20.81■□□□□ 0.92
CNKSR1Q969H4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 TOP3BP1-201ENST00000420768 1380 ntBASIC20.81■□□□□ 0.92
CNKSR1Q969H4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CNKSR1Q969H4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 ATP5G2P4-201ENST00000442175 420 ntBASIC20.8■□□□□ 0.92
CNKSR1Q969H4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 HLA-V-204ENST00000476601 1289 ntBASIC20.8■□□□□ 0.92
CNKSR1Q969H4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms