Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDH20Q8N6Y1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH20Q8N6Y1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 RPL13AP23-201ENST00000480739 586 ntBASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 SLC25A1P1-201ENST00000528351 927 ntBASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 AC145285.3-201ENST00000564603 959 ntBASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 AC117500.6-201ENST00000624871 588 ntBASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH20Q8N6Y1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 AF228730.7-201ENST00000641842 219 ntBASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 AC006504.4-201ENST00000592118 1568 ntBASIC17.57■□□□□ 0.4
PCDH20Q8N6Y1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 GPR89P-201ENST00000407924 1495 ntBASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RNA5SP415-201ENST00000517246 115 ntBASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 AC106730.1-201ENST00000566722 1090 ntBASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDH20Q8N6Y1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms