Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 MYCLP1-201ENST00000372451 1075 ntBASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AC104692.2-201ENST00000603054 253 ntBASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AC079776.2-201ENST00000641154 1609 ntBASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 SPDYE21P-201ENST00000413323 827 ntBASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AC079781.3-201ENST00000449110 356 ntBASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 AC008608.2-201ENST00000606089 416 ntBASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf42Q8N5U0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 AC009336.1-201ENST00000608941 1553 ntBASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 AC148477.5-201ENST00000625164 1645 ntBASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 AC003669.1-201ENST00000334569 611 ntBASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 FAAHP1-202ENST00000446499 1238 ntBASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 PRYP5-201ENST00000451909 266 ntBASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf42Q8N5U0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms