Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 KRT18P3-201ENST00000451602 1288 ntBASIC17.23■□□□□ 0.35
RBFAQ8N0V3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.23■□□□□ 0.35
RBFAQ8N0V3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.23■□□□□ 0.35
RBFAQ8N0V3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 LTB4R2-202ENST00000528054 3092 ntBASIC17.23■□□□□ 0.35
RBFAQ8N0V3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RBFAQ8N0V3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 AL591424.1-201ENST00000442569 1213 ntBASIC17.22■□□□□ 0.35
RBFAQ8N0V3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 AC136632.2-201ENST00000512891 861 ntBASIC17.22■□□□□ 0.35
RBFAQ8N0V3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 AC005593.1-201ENST00000624894 515 ntBASIC17.22■□□□□ 0.35
RBFAQ8N0V3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 AL135999.2-201ENST00000622438 1686 ntBASIC17.22■□□□□ 0.35
RBFAQ8N0V3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBFAQ8N0V3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.21■□□□□ 0.35
RBFAQ8N0V3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 AL589182.2-201ENST00000619332 1049 ntBASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
RBFAQ8N0V3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.21■□□□□ 0.34
RBFAQ8N0V3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RBFAQ8N0V3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RBFAQ8N0V3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RBFAQ8N0V3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.21■□□□□ 0.34
RBFAQ8N0V3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 AC006504.4-201ENST00000592118 1568 ntBASIC17.2■□□□□ 0.34
RBFAQ8N0V3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBFAQ8N0V3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms