Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APLFQ8IW19 LINC00167-201ENST00000530583 1419 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.12■□□□□ 0.33
APLFQ8IW19 KRT89P-201ENST00000620027 1478 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 AC105917.1-201ENST00000506637 2539 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.11■□□□□ 0.33
APLFQ8IW19 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
APLFQ8IW19 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.11■□□□□ 0.33
APLFQ8IW19 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 RN7SL606P-201ENST00000472779 293 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 VENTXP7-201ENST00000475503 772 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.11■□□□□ 0.33
APLFQ8IW19 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.11■□□□□ 0.33
APLFQ8IW19 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.11■□□□□ 0.33
APLFQ8IW19 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.11■□□□□ 0.33
APLFQ8IW19 AL592071.1-201ENST00000611956 408 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
APLFQ8IW19 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
APLFQ8IW19 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
APLFQ8IW19 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APLFQ8IW19 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 AC023824.1-201ENST00000562945 2975 ntBASIC17.1■□□□□ 0.33
APLFQ8IW19 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.1■□□□□ 0.33
APLFQ8IW19 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 KRT16P4-201ENST00000453883 522 ntBASIC17.1■□□□□ 0.33
APLFQ8IW19 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.1■□□□□ 0.33
APLFQ8IW19 AC023511.2-201ENST00000618803 211 ntBASIC17.1■□□□□ 0.33
APLFQ8IW19 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.1■□□□□ 0.33
APLFQ8IW19 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APLFQ8IW19 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
APLFQ8IW19 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.1■□□□□ 0.33
APLFQ8IW19 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
APLFQ8IW19 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APLFQ8IW19 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
APLFQ8IW19 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
APLFQ8IW19 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.09■□□□□ 0.33
APLFQ8IW19 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.09■□□□□ 0.33
APLFQ8IW19 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms