Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC093525.9-201ENST00000624961 1746 ntBASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 AP002414.2-201ENST00000591780 3365 ntBASIC14.33□□□□□ -0.11
ZNF546Q86UE3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF546Q86UE3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 RPS2P4-201ENST00000476944 856 ntBASIC14.33□□□□□ -0.12
ZNF546Q86UE3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 AC104771.1-201ENST00000603335 964 ntBASIC14.33□□□□□ -0.12
ZNF546Q86UE3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.33□□□□□ -0.12
ZNF546Q86UE3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF546Q86UE3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 RNA5SP413-201ENST00000516373 109 ntBASIC14.32□□□□□ -0.12
ZNF546Q86UE3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 MIR3180-5-201ENST00000583743 153 ntBASIC14.32□□□□□ -0.12
ZNF546Q86UE3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 HOXB1-202ENST00000577092 1414 ntBASIC14.32□□□□□ -0.12
ZNF546Q86UE3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF546Q86UE3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF546Q86UE3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms