Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC139713.2-201ENST00000641328 2723 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 TFAMP1-201ENST00000412727 736 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AC093214.1-201ENST00000511688 1107 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AC051619.7-201ENST00000568314 623 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI1Q7Z5J4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AC092364.2-202ENST00000597012 1073 ntBASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AL009183.1-201ENST00000603760 355 ntBASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AC026120.1-201ENST00000611536 926 ntBASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 AC141586.5-201ENST00000624546 2050 ntBASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAI1Q7Z5J4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AL390955.2-201ENST00000603032 514 ntBASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 FAM185BP-201ENST00000443595 716 ntBASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 RARRES2P8-201ENST00000566335 367 ntBASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AL139327.4-201ENST00000612362 153 ntBASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms