Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 CU639417.3-201ENST00000624240 1404 ntBASIC17.47■□□□□ 0.39
DENND4AQ7Z401 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
DENND4AQ7Z401 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND4AQ7Z401 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 MIR346-201ENST00000362234 95 ntBASIC17.46■□□□□ 0.38
DENND4AQ7Z401 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 IGHV3-71-201ENST00000523324 359 ntBASIC17.46■□□□□ 0.38
DENND4AQ7Z401 AC027369.6-201ENST00000525520 931 ntBASIC17.46■□□□□ 0.38
DENND4AQ7Z401 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.46■□□□□ 0.38
DENND4AQ7Z401 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 AC131009.4-201ENST00000624048 1740 ntBASIC17.45■□□□□ 0.38
DENND4AQ7Z401 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 SPTLC1P1-201ENST00000447199 261 ntBASIC17.45■□□□□ 0.38
DENND4AQ7Z401 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 AC073389.1-201ENST00000595595 795 ntBASIC17.45■□□□□ 0.38
DENND4AQ7Z401 AL844908.2-201ENST00000609461 460 ntBASIC17.45■□□□□ 0.38
DENND4AQ7Z401 MIR6752-201ENST00000618442 71 ntBASIC17.45■□□□□ 0.38
DENND4AQ7Z401 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DENND4AQ7Z401 EGFEM1P-202ENST00000431685 1563 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 FAM220BP-201ENST00000377689 816 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 LINC00895-201ENST00000629028 1637 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 AP3S2-216ENST00000617003 1561 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DENND4AQ7Z401 AL080243.2-201ENST00000418783 582 ntBASIC17.44■□□□□ 0.38
DENND4AQ7Z401 U91328.1-201ENST00000437528 223 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms