Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AP000344.2-201ENST00000512987 629 ntBASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 AL121761.2-201ENST00000598007 1648 ntBASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 RFPL4AP1-201ENST00000530883 850 ntBASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 REXO1L3P-201ENST00000622202 1288 ntBASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 AC105339.1-204ENST00000636249 355 ntBASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC62Q6P9F0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 AC133963.1-201ENST00000504166 1679 ntBASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC62Q6P9F0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 PKD1P1-201ENST00000458669 6805 ntBASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC62Q6P9F0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 ADH5P3-201ENST00000433842 1137 ntBASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CCDC62Q6P9F0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC62Q6P9F0 AL390961.4-201ENST00000623958 2535 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms