Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC138969.3-201ENST00000546612 1459 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC138932.2-201ENST00000548268 1459 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC126755.4-201ENST00000549796 1459 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 RPS2P32-201ENST00000439199 892 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC073592.8-201ENST00000624126 511 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC140912.1-201ENST00000577171 1054 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 MIR4492-201ENST00000581627 80 ntBASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 DFFBP1-201ENST00000433250 979 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 GNAQP1-201ENST00000444815 1067 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ZNF890P-202ENST00000530367 1156 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 CU639417.3-201ENST00000624240 1404 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AC241585.1-201ENST00000433527 519 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PRYP6-201ENST00000514804 343 ntBASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13DQ5THJ4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13DQ5THJ4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms