Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D4BQ5SQS7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.12■□□□□ 0.33
SH2D4BQ5SQS7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 PCDHA1-201ENST00000378133 2726 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AC005521.1-201ENST00000393351 872 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AC113347.1-201ENST00000413321 391 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 HLA-F-220ENST00000434407 884 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 KRT18P57-201ENST00000443599 1254 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 AC012306.2-201ENST00000609350 630 ntBASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D4BQ5SQS7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 AC046185.3-201ENST00000623228 1824 ntBASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SPDYE15P-201ENST00000424157 909 ntBASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D4BQ5SQS7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 AC007326.2-201ENST00000624224 7579 ntBASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 TERF1P1-201ENST00000311003 1181 ntBASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 IGHGP-201ENST00000390555 1178 ntBASIC17.09■□□□□ 0.33
SH2D4BQ5SQS7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms