Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 AC069335.1-201ENST00000489972 472 ntBASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 AL135744.1-201ENST00000565098 629 ntBASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 PP12613-201ENST00000424958 2230 ntBASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHROOM1Q2M3G4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 TFAMP1-201ENST00000412727 736 ntBASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.91■□□□□ 0.78
SHROOM1Q2M3G4 AC093525.9-201ENST00000624961 1746 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 GPS2P2-201ENST00000430745 888 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SPDYE11-202ENST00000450699 704 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SPDYE9P-201ENST00000570642 692 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SPDYE10P-202ENST00000612005 668 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SPDYE8P-202ENST00000612377 668 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 AC009093.7-201ENST00000623853 1223 ntBASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHROOM1Q2M3G4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SHROOM1Q2M3G4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SHROOM1Q2M3G4 FZD10-202ENST00000539839 3282 ntBASIC19.89■□□□□ 0.78
SHROOM1Q2M3G4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms