Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL20P78556 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CCL20P78556 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL20P78556 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL20P78556 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL20P78556 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL20P78556 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL20P78556 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.56□□□□□ -0.24
CCL20P78556 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL20P78556 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL20P78556 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL20P78556 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL20P78556 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL20P78556 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CCL20P78556 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL20P78556 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCL20P78556 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL20P78556 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCL20P78556 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CCL20P78556 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 AC006538.1-201ENST00000567905 1585 ntBASIC13.55□□□□□ -0.24
CCL20P78556 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL20P78556 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL20P78556 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 AC239809.2-201ENST00000415381 517 ntBASIC13.55□□□□□ -0.24
CCL20P78556 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL20P78556 TSPY6P-201ENST00000448518 926 ntBASIC13.55□□□□□ -0.24
CCL20P78556 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL20P78556 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL20P78556 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL20P78556 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL20P78556 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CCL20P78556 AC069544.1-201ENST00000609399 999 ntBASIC13.55□□□□□ -0.24
CCL20P78556 AC112497.1-201ENST00000624824 639 ntBASIC13.55□□□□□ -0.24
CCL20P78556 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL20P78556 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.55□□□□□ -0.24
CCL20P78556 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.55□□□□□ -0.24
CCL20P78556 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL20P78556 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL20P78556 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms