Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE1AP54750 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE1AP54750 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE1AP54750 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE1AP54750 AL691432.3-201ENST00000621860 400 ntBASIC20.95■□□□□ 0.94
PDE1AP54750 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE1AP54750 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PDE1AP54750 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PDE1AP54750 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE1AP54750 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE1AP54750 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE1AP54750 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
PDE1AP54750 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.94■□□□□ 0.94
PDE1AP54750 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.94■□□□□ 0.94
PDE1AP54750 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.94■□□□□ 0.94
PDE1AP54750 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.94■□□□□ 0.94
PDE1AP54750 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.94■□□□□ 0.94
PDE1AP54750 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.94■□□□□ 0.94
PDE1AP54750 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.94■□□□□ 0.94
PDE1AP54750 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 TERC-201ENST00000602385 541 ntBASIC20.94■□□□□ 0.94
PDE1AP54750 AC107918.4-202ENST00000641623 219 ntBASIC20.94■□□□□ 0.94
PDE1AP54750 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PDE1AP54750 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PDE1AP54750 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE1AP54750 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE1AP54750 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
PDE1AP54750 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.93■□□□□ 0.94
PDE1AP54750 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PDE1AP54750 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PDE1AP54750 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE1AP54750 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.93■□□□□ 0.94
PDE1AP54750 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.93■□□□□ 0.94
PDE1AP54750 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PDE1AP54750 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDE1AP54750 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PDE1AP54750 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PDE1AP54750 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PDE1AP54750 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PDE1AP54750 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PDE1AP54750 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 AC006504.4-201ENST00000592118 1568 ntBASIC20.93■□□□□ 0.94
PDE1AP54750 HCG11-201ENST00000411553 5696 ntBASIC20.93■□□□□ 0.94
PDE1AP54750 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE1AP54750 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE1AP54750 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms