Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC004461.2-201ENST00000629517 803 ntBASIC19.14■□□□□ 0.65
LBX1P52954 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LBX1P52954 FOXO1B-201ENST00000504678 1527 ntBASIC19.14■□□□□ 0.65
LBX1P52954 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LBX1P52954 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LBX1P52954 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.13■□□□□ 0.65
LBX1P52954 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LBX1P52954 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.13■□□□□ 0.65
LBX1P52954 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.13■□□□□ 0.65
LBX1P52954 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.13■□□□□ 0.65
LBX1P52954 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.13■□□□□ 0.65
LBX1P52954 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.13■□□□□ 0.65
LBX1P52954 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.13■□□□□ 0.65
LBX1P52954 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 RPSAP52-203ENST00000622976 1023 ntBASIC19.13■□□□□ 0.65
LBX1P52954 AC128714.1-201ENST00000637035 887 ntBASIC19.13■□□□□ 0.65
LBX1P52954 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.13■□□□□ 0.65
LBX1P52954 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LBX1P52954 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LBX1P52954 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LBX1P52954 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LBX1P52954 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.12■□□□□ 0.65
LBX1P52954 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.12■□□□□ 0.65
LBX1P52954 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.12■□□□□ 0.65
LBX1P52954 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.12■□□□□ 0.65
LBX1P52954 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.12■□□□□ 0.65
LBX1P52954 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.12■□□□□ 0.65
LBX1P52954 AC091271.1-201ENST00000611877 1162 ntBASIC19.12■□□□□ 0.65
LBX1P52954 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.12■□□□□ 0.65
LBX1P52954 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LBX1P52954 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
LBX1P52954 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.11■□□□□ 0.65
LBX1P52954 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.11■□□□□ 0.65
LBX1P52954 CDC14C-201ENST00000428251 1719 ntBASIC19.11■□□□□ 0.65
LBX1P52954 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.11■□□□□ 0.65
LBX1P52954 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.11■□□□□ 0.65
LBX1P52954 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.11■□□□□ 0.65
LBX1P52954 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.11■□□□□ 0.65
LBX1P52954 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.11■□□□□ 0.65
LBX1P52954 AC105129.2-201ENST00000559536 390 ntBASIC19.11■□□□□ 0.65
LBX1P52954 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.11■□□□□ 0.65
LBX1P52954 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.11■□□□□ 0.65
LBX1P52954 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.11■□□□□ 0.65
LBX1P52954 AC010328.2-201ENST00000597698 1111 ntBASIC19.11■□□□□ 0.65
LBX1P52954 SPCS2P2-201ENST00000603270 608 ntBASIC19.11■□□□□ 0.65
LBX1P52954 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.11■□□□□ 0.65
LBX1P52954 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LBX1P52954 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LBX1P52954 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LBX1P52954 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms