Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN3P51790 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCN3P51790 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.8■□□□□ 0.6
CLCN3P51790 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN3P51790 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLCN3P51790 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.8■□□□□ 0.6
CLCN3P51790 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 SNHG9-202ENST00000564014 471 ntBASIC18.8■□□□□ 0.6
CLCN3P51790 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN3P51790 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLCN3P51790 FZD10-202ENST00000539839 3282 ntBASIC18.8■□□□□ 0.6
CLCN3P51790 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLCN3P51790 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN3P51790 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN3P51790 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 AC116353.5-201ENST00000638148 1699 ntBASIC18.79■□□□□ 0.6
CLCN3P51790 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLCN3P51790 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCN3P51790 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CLCN3P51790 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN3P51790 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN3P51790 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 CROCCP2-202ENST00000412962 2773 ntBASIC18.79■□□□□ 0.6
CLCN3P51790 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLCN3P51790 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLCN3P51790 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLCN3P51790 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN3P51790 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN3P51790 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN3P51790 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN3P51790 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 AC254562.1-201ENST00000417586 456 ntBASIC18.78■□□□□ 0.6
CLCN3P51790 CNN2P11-201ENST00000429351 262 ntBASIC18.78■□□□□ 0.6
CLCN3P51790 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN3P51790 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN3P51790 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN3P51790 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN3P51790 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN3P51790 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN3P51790 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN3P51790 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN3P51790 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CLCN3P51790 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN3P51790 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms