Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.99■□□□□ 0.95
PDE6BP35913 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.99■□□□□ 0.95
PDE6BP35913 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.99■□□□□ 0.95
PDE6BP35913 AC091167.2-201ENST00000579581 588 ntBASIC20.99■□□□□ 0.95
PDE6BP35913 AC004233.3-201ENST00000607794 1269 ntBASIC20.99■□□□□ 0.95
PDE6BP35913 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 LYSMD4-203ENST00000378904 2122 ntBASIC20.99■□□□□ 0.95
PDE6BP35913 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 AC138028.4-201ENST00000564984 1845 ntBASIC20.99■□□□□ 0.95
PDE6BP35913 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.99■□□□□ 0.95
PDE6BP35913 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDE6BP35913 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PDE6BP35913 AC022144.1-201ENST00000602255 1580 ntBASIC20.98■□□□□ 0.95
PDE6BP35913 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6BP35913 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6BP35913 AC018529.1-201ENST00000613063 361 ntBASIC20.98■□□□□ 0.95
PDE6BP35913 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.98■□□□□ 0.95
PDE6BP35913 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 AC016027.1-202ENST00000607927 1699 ntBASIC20.98■□□□□ 0.95
PDE6BP35913 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PDE6BP35913 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PDE6BP35913 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6BP35913 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDE6BP35913 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6BP35913 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
PDE6BP35913 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6BP35913 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PDE6BP35913 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE6BP35913 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDE6BP35913 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6BP35913 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 MIR6752-201ENST00000618442 71 ntBASIC20.97■□□□□ 0.95
PDE6BP35913 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6BP35913 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE6BP35913 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6BP35913 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE6BP35913 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6BP35913 SLC22A20-204ENST00000530038 1673 ntBASIC20.96■□□□□ 0.95
PDE6BP35913 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6BP35913 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.96■□□□□ 0.95
PDE6BP35913 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDE6BP35913 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.96■□□□□ 0.95
PDE6BP35913 AP001350.2-201ENST00000625104 1094 ntBASIC20.96■□□□□ 0.95
PDE6BP35913 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDE6BP35913 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDE6BP35913 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDE6BP35913 TOP3BP1-201ENST00000420768 1380 ntBASIC20.96■□□□□ 0.95
PDE6BP35913 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6BP35913 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PDE6BP35913 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms