Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL1P22362 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CCL1P22362 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCL1P22362 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL1P22362 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 UBALD1-205ENST00000590891 2641 ntBASIC14.78□□□□□ -0.04
CCL1P22362 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCL1P22362 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL1P22362 LINC00982-205ENST00000420957 435 ntBASIC14.78□□□□□ -0.04
CCL1P22362 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 AC097637.2-201ENST00000624096 1997 ntBASIC14.78□□□□□ -0.04
CCL1P22362 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL1P22362 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL1P22362 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL1P22362 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL1P22362 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.77□□□□□ -0.04
CCL1P22362 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 LINC00895-201ENST00000629028 1637 ntBASIC14.77□□□□□ -0.04
CCL1P22362 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
CCL1P22362 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CCL1P22362 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CCL1P22362 AC092171.3-201ENST00000610122 2651 ntBASIC14.77□□□□□ -0.04
CCL1P22362 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL1P22362 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL1P22362 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCL1P22362 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL1P22362 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 ATP5G2P1-201ENST00000433580 426 ntBASIC14.77□□□□□ -0.05
CCL1P22362 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.77□□□□□ -0.05
CCL1P22362 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL1P22362 AP000867.3-201ENST00000524675 377 ntBASIC14.77□□□□□ -0.05
CCL1P22362 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL1P22362 MIR5100-201ENST00000579544 119 ntBASIC14.77□□□□□ -0.05
CCL1P22362 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL1P22362 AC069148.1-201ENST00000608741 768 ntBASIC14.77□□□□□ -0.05
CCL1P22362 AC010331.1-201ENST00000611423 582 ntBASIC14.77□□□□□ -0.05
CCL1P22362 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCL1P22362 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CCL1P22362 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCL1P22362 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCL1P22362 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL1P22362 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.77□□□□□ -0.05
CCL1P22362 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL1P22362 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CCL1P22362 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 AL021920.2-201ENST00000624828 1351 ntBASIC14.76□□□□□ -0.05
CCL1P22362 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms