Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.13■□□□□ 0.17
CCL4P13236 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.13■□□□□ 0.17
CCL4P13236 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.13■□□□□ 0.17
CCL4P13236 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL4P13236 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 AC133963.1-201ENST00000504166 1679 ntBASIC16.13■□□□□ 0.17
CCL4P13236 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 AKAP8P1-201ENST00000434743 1349 ntBASIC16.13■□□□□ 0.17
CCL4P13236 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCL4P13236 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL4P13236 AC135050.7-201ENST00000624508 2218 ntBASIC16.13■□□□□ 0.17
CCL4P13236 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCL4P13236 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL4P13236 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL4P13236 AC015911.4-201ENST00000588022 1070 ntBASIC16.12■□□□□ 0.17
CCL4P13236 AL009183.1-201ENST00000603760 355 ntBASIC16.12■□□□□ 0.17
CCL4P13236 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 AL161645.1-201ENST00000622716 1255 ntBASIC16.12■□□□□ 0.17
CCL4P13236 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL4P13236 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL4P13236 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCL4P13236 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCL4P13236 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL4P13236 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 AC092474.2-201ENST00000424288 719 ntBASIC16.11■□□□□ 0.17
CCL4P13236 GPS2P2-201ENST00000430745 888 ntBASIC16.11■□□□□ 0.17
CCL4P13236 RBPMS2P1-201ENST00000437762 623 ntBASIC16.11■□□□□ 0.17
CCL4P13236 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 AC067863.1-201ENST00000494933 530 ntBASIC16.11■□□□□ 0.17
CCL4P13236 AC093214.1-201ENST00000511688 1107 ntBASIC16.11■□□□□ 0.17
CCL4P13236 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL4P13236 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL4P13236 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL4P13236 MIR4745-201ENST00000577608 62 ntBASIC16.11■□□□□ 0.17
CCL4P13236 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL4P13236 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL4P13236 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL4P13236 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL4P13236 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CCL4P13236 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCL4P13236 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL4P13236 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms