Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC099336.1-202ENST00000602961 463 ntBASIC16.8■□□□□ 0.28
PCNAP12004 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.8■□□□□ 0.28
PCNAP12004 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.8■□□□□ 0.28
PCNAP12004 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
PCNAP12004 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.8■□□□□ 0.28
PCNAP12004 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNAP12004 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
PCNAP12004 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
PCNAP12004 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PCNAP12004 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCNAP12004 RCN1P2-201ENST00000398357 915 ntBASIC16.79■□□□□ 0.28
PCNAP12004 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCNAP12004 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.79■□□□□ 0.28
PCNAP12004 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.79■□□□□ 0.28
PCNAP12004 AC012615.1-201ENST00000565797 1299 ntBASIC16.79■□□□□ 0.28
PCNAP12004 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.79■□□□□ 0.28
PCNAP12004 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCNAP12004 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.79■□□□□ 0.28
PCNAP12004 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCNAP12004 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCNAP12004 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCNAP12004 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.78■□□□□ 0.28
PCNAP12004 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 NUS1P2-201ENST00000417358 873 ntBASIC16.78■□□□□ 0.28
PCNAP12004 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.78■□□□□ 0.28
PCNAP12004 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.78■□□□□ 0.28
PCNAP12004 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.78■□□□□ 0.28
PCNAP12004 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
PCNAP12004 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCNAP12004 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PCNAP12004 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCNAP12004 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCNAP12004 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCNAP12004 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.77■□□□□ 0.28
PCNAP12004 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.77■□□□□ 0.28
PCNAP12004 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCNAP12004 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.77■□□□□ 0.28
PCNAP12004 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.77■□□□□ 0.28
PCNAP12004 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 STK19B-204ENST00000512515 211 ntBASIC16.77■□□□□ 0.28
PCNAP12004 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.77■□□□□ 0.28
PCNAP12004 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.77■□□□□ 0.28
PCNAP12004 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.77■□□□□ 0.28
PCNAP12004 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCNAP12004 AC138894.3-201ENST00000603787 634 ntBASIC16.77■□□□□ 0.28
PCNAP12004 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.77■□□□□ 0.28
PCNAP12004 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms