Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AF186996.4-201ENST00000467186 377 ntBASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 AC005915.1-201ENST00000624912 2018 ntBASIC17.42■□□□□ 0.38
HLA-DQB2P05538 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AC243591.1-201ENST00000452967 1364 ntBASIC17.41■□□□□ 0.38
HLA-DQB2P05538 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AP002414.1-201ENST00000391405 1147 ntBASIC17.41■□□□□ 0.38
HLA-DQB2P05538 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 KRT18P27-201ENST00000427733 1299 ntBASIC17.41■□□□□ 0.38
HLA-DQB2P05538 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AL160237.2-201ENST00000556165 472 ntBASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AC006557.2-201ENST00000592985 1240 ntBASIC17.41■□□□□ 0.38
HLA-DQB2P05538 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQB2P05538 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 AC012640.2-201ENST00000561606 901 ntBASIC17.4■□□□□ 0.38
HLA-DQB2P05538 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 AL121894.2-201ENST00000602977 491 ntBASIC17.4■□□□□ 0.38
HLA-DQB2P05538 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQB2P05538 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms