Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 AC093010.1-201ENST00000473625 1624 ntBASIC14.43□□□□□ -0.1
ABCA1O95477 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 FAM58CP-201ENST00000435741 640 ntBASIC14.43□□□□□ -0.1
ABCA1O95477 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.42□□□□□ -0.1
ABCA1O95477 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 ADH5P3-201ENST00000433842 1137 ntBASIC14.42□□□□□ -0.1
ABCA1O95477 RPS15P9-201ENST00000494093 319 ntBASIC14.42□□□□□ -0.1
ABCA1O95477 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 AC022145.2-201ENST00000598203 171 ntBASIC14.42□□□□□ -0.1
ABCA1O95477 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.42□□□□□ -0.1
ABCA1O95477 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ABCA1O95477 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
ABCA1O95477 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ABCA1O95477 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA1O95477 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA1O95477 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA1O95477 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 AC093214.1-201ENST00000511688 1107 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA1O95477 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCA1O95477 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA1O95477 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA1O95477 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ABCA1O95477 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 IGLL3P-201ENST00000412472 434 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.41□□□□□ -0.1
ABCA1O95477 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.41□□□□□ -0.1
ABCA1O95477 AC109322.1-201ENST00000524499 1264 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 AC096734.2-201ENST00000562054 433 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.41□□□□□ -0.1
ABCA1O95477 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA1O95477 AC068137.2-201ENST00000605408 478 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 AC004706.3-202ENST00000621574 984 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 AC007064.4-201ENST00000637740 555 ntBASIC14.41□□□□□ -0.1
ABCA1O95477 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA1O95477 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA1O95477 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms