Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH8O95206 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 AC134043.2-201ENST00000624206 2238 ntBASIC17.16■□□□□ 0.34
PCDH8O95206 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 MCCD1P2-201ENST00000423228 335 ntBASIC17.16■□□□□ 0.34
PCDH8O95206 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH8O95206 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDH8O95206 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PCDH8O95206 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDH8O95206 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH8O95206 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH8O95206 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH8O95206 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH8O95206 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH8O95206 CXCL1P1-201ENST00000502804 216 ntBASIC17.15■□□□□ 0.34
PCDH8O95206 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH8O95206 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH8O95206 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH8O95206 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH8O95206 AC007064.4-201ENST00000637740 555 ntBASIC17.15■□□□□ 0.34
PCDH8O95206 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH8O95206 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH8O95206 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDH8O95206 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDH8O95206 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH8O95206 AC005829.1-201ENST00000570002 483 ntBASIC17.14■□□□□ 0.33
PCDH8O95206 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PCDH8O95206 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH8O95206 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 AC079781.4-201ENST00000641908 219 ntBASIC17.14■□□□□ 0.33
PCDH8O95206 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH8O95206 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH8O95206 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
PCDH8O95206 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH8O95206 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH8O95206 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms