Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
BEST1O76090 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.98■□□□□ 0.47
BEST1O76090 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST1O76090 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.98■□□□□ 0.47
BEST1O76090 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 REXO1L3P-201ENST00000622202 1288 ntBASIC17.98■□□□□ 0.47
BEST1O76090 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.98■□□□□ 0.47
BEST1O76090 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 AC092068.3-201ENST00000587894 2016 ntBASIC17.98■□□□□ 0.47
BEST1O76090 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST1O76090 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
BEST1O76090 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
BEST1O76090 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
BEST1O76090 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST1O76090 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
BEST1O76090 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.97■□□□□ 0.47
BEST1O76090 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.97■□□□□ 0.47
BEST1O76090 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.97■□□□□ 0.47
BEST1O76090 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.97■□□□□ 0.47
BEST1O76090 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.97■□□□□ 0.47
BEST1O76090 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST1O76090 ACTL9-202ENST00000612068 1252 ntBASIC17.97■□□□□ 0.47
BEST1O76090 AL513190.1-201ENST00000621254 727 ntBASIC17.97■□□□□ 0.47
BEST1O76090 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST1O76090 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST1O76090 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST1O76090 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST1O76090 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST1O76090 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 AP001094.4-201ENST00000579008 2176 ntBASIC17.96■□□□□ 0.47
BEST1O76090 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 CXCL1P1-201ENST00000502804 216 ntBASIC17.96■□□□□ 0.47
BEST1O76090 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.96■□□□□ 0.47
BEST1O76090 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 AC096734.2-201ENST00000562054 433 ntBASIC17.96■□□□□ 0.47
BEST1O76090 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.96■□□□□ 0.47
BEST1O76090 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
BEST1O76090 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST1O76090 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST1O76090 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
BEST1O76090 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.96■□□□□ 0.46
BEST1O76090 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST1O76090 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BEST1O76090 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST1O76090 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST1O76090 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
BEST1O76090 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms