Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDCD6O75340 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PDCD6O75340 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.54□□□□□ -0.08
PDCD6O75340 KLF4P1-201ENST00000412782 1185 ntBASIC14.54□□□□□ -0.08
PDCD6O75340 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.54□□□□□ -0.08
PDCD6O75340 DUX4L26-201ENST00000489078 1255 ntBASIC14.54□□□□□ -0.08
PDCD6O75340 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.54□□□□□ -0.08
PDCD6O75340 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.54□□□□□ -0.08
PDCD6O75340 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 AL136038.3-201ENST00000561909 1096 ntBASIC14.54□□□□□ -0.08
PDCD6O75340 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.54□□□□□ -0.08
PDCD6O75340 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.54□□□□□ -0.08
PDCD6O75340 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PDCD6O75340 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PDCD6O75340 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
PDCD6O75340 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
PDCD6O75340 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.53□□□□□ -0.08
PDCD6O75340 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.53□□□□□ -0.08
PDCD6O75340 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.53□□□□□ -0.08
PDCD6O75340 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.53□□□□□ -0.08
PDCD6O75340 AC011467.2-201ENST00000598425 242 ntBASIC14.53□□□□□ -0.08
PDCD6O75340 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.53□□□□□ -0.08
PDCD6O75340 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
PDCD6O75340 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDCD6O75340 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.52□□□□□ -0.08
PDCD6O75340 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.52□□□□□ -0.08
PDCD6O75340 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDCD6O75340 FER1L4-210ENST00000615531 5998 ntBASIC14.52□□□□□ -0.08
PDCD6O75340 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDCD6O75340 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDCD6O75340 FRMD8P1-201ENST00000440433 1524 ntBASIC14.52□□□□□ -0.08
PDCD6O75340 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDCD6O75340 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDCD6O75340 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
PDCD6O75340 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.52□□□□□ -0.09
PDCD6O75340 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.52□□□□□ -0.09
PDCD6O75340 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.52□□□□□ -0.09
PDCD6O75340 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.52□□□□□ -0.09
PDCD6O75340 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.52□□□□□ -0.09
PDCD6O75340 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.52□□□□□ -0.09
PDCD6O75340 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDCD6O75340 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PDCD6O75340 AC132938.5-201ENST00000624980 1813 ntBASIC14.52□□□□□ -0.09
PDCD6O75340 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms