Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 POM121L3P-201ENST00000419331 1163 ntBASIC18.61■□□□□ 0.57
RNF40O75150 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF40O75150 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF40O75150 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF40O75150 AP001005.1-201ENST00000571755 1248 ntBASIC18.61■□□□□ 0.57
RNF40O75150 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF40O75150 BNIP3P18-201ENST00000593976 575 ntBASIC18.61■□□□□ 0.57
RNF40O75150 AL671883.3-201ENST00000603274 991 ntBASIC18.61■□□□□ 0.57
RNF40O75150 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF40O75150 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF40O75150 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
RNF40O75150 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF40O75150 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF40O75150 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 AC120057.1-201ENST00000483947 663 ntBASIC18.6■□□□□ 0.57
RNF40O75150 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF40O75150 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF40O75150 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF40O75150 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF40O75150 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF40O75150 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF40O75150 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF40O75150 FAM197Y8-203ENST00000450145 560 ntBASIC18.59■□□□□ 0.57
RNF40O75150 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF40O75150 AL591684.3-201ENST00000605187 298 ntBASIC18.59■□□□□ 0.57
RNF40O75150 AL773604.1-201ENST00000617417 272 ntBASIC18.59■□□□□ 0.57
RNF40O75150 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF40O75150 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF40O75150 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RNF40O75150 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF40O75150 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF40O75150 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF40O75150 AL163051.1-201ENST00000569214 1512 ntBASIC18.59■□□□□ 0.57
RNF40O75150 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF40O75150 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF40O75150 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF40O75150 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF40O75150 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms