Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
HCN1O60741 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.13■□□□□ 0.17
HCN1O60741 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.13■□□□□ 0.17
HCN1O60741 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.13■□□□□ 0.17
HCN1O60741 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 CROCCP2-202ENST00000412962 2773 ntBASIC16.13■□□□□ 0.17
HCN1O60741 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
HCN1O60741 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCN1O60741 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HCN1O60741 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.12■□□□□ 0.17
HCN1O60741 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 AL355877.3-201ENST00000622820 899 ntBASIC16.12■□□□□ 0.17
HCN1O60741 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.12■□□□□ 0.17
HCN1O60741 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.12■□□□□ 0.17
HCN1O60741 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCN1O60741 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCN1O60741 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 AP001094.4-201ENST00000579008 2176 ntBASIC16.11■□□□□ 0.17
HCN1O60741 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.11■□□□□ 0.17
HCN1O60741 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HCN1O60741 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
HCN1O60741 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 FAM220CP-201ENST00000395253 831 ntBASIC16.11■□□□□ 0.17
HCN1O60741 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 SCARNA2-201ENST00000458748 420 ntBASIC16.11■□□□□ 0.17
HCN1O60741 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.11■□□□□ 0.17
HCN1O60741 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
HCN1O60741 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HCN1O60741 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HCN1O60741 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
HCN1O60741 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.11■□□□□ 0.17
HCN1O60741 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCN1O60741 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms