Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.6□□□□□ -0.23
CUBNO60494 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.6□□□□□ -0.23
CUBNO60494 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.6□□□□□ -0.23
CUBNO60494 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 MYCLP1-201ENST00000372451 1075 ntBASIC13.6□□□□□ -0.23
CUBNO60494 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CUBNO60494 AC106886.1-201ENST00000568660 600 ntBASIC13.6□□□□□ -0.23
CUBNO60494 GPR182-203ENST00000622922 591 ntBASIC13.6□□□□□ -0.23
CUBNO60494 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CUBNO60494 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUBNO60494 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.59□□□□□ -0.23
CUBNO60494 AC109635.5-201ENST00000533593 962 ntBASIC13.59□□□□□ -0.23
CUBNO60494 AL009183.1-201ENST00000603760 355 ntBASIC13.59□□□□□ -0.23
CUBNO60494 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 BX276092.7-203ENST00000637198 1536 ntBASIC13.59□□□□□ -0.23
CUBNO60494 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.59□□□□□ -0.23
CUBNO60494 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.59□□□□□ -0.23
CUBNO60494 ALG1L8P-201ENST00000533887 760 ntBASIC13.59□□□□□ -0.23
CUBNO60494 AC140912.1-201ENST00000577171 1054 ntBASIC13.59□□□□□ -0.23
CUBNO60494 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.59□□□□□ -0.23
CUBNO60494 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.59□□□□□ -0.23
CUBNO60494 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.59□□□□□ -0.23
CUBNO60494 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.59□□□□□ -0.23
CUBNO60494 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUBNO60494 WASH6P-202ENST00000359512 1437 ntBASIC13.59□□□□□ -0.23
CUBNO60494 AL133373.2-201ENST00000623187 2828 ntBASIC13.59□□□□□ -0.23
CUBNO60494 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CUBNO60494 AC004408.2-201ENST00000623613 2777 ntBASIC13.58□□□□□ -0.23
CUBNO60494 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CUBNO60494 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.58□□□□□ -0.23
CUBNO60494 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.58□□□□□ -0.23
CUBNO60494 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CUBNO60494 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CUBNO60494 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
CUBNO60494 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CUBNO60494 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CUBNO60494 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 AL590560.3-201ENST00000623350 461 ntBASIC13.58□□□□□ -0.24
CUBNO60494 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.58□□□□□ -0.24
CUBNO60494 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUBNO60494 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms