Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.33■□□□□ 0.2
UPK1AO00322 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK1AO00322 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1AO00322 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1AO00322 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK1AO00322 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1AO00322 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UPK1AO00322 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1AO00322 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1AO00322 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1AO00322 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1AO00322 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
UPK1AO00322 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1AO00322 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
UPK1AO00322 AC099336.1-202ENST00000602961 463 ntBASIC16.32■□□□□ 0.2
UPK1AO00322 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1AO00322 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1AO00322 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UPK1AO00322 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UPK1AO00322 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 AC132938.5-201ENST00000624980 1813 ntBASIC16.31■□□□□ 0.2
UPK1AO00322 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK1AO00322 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
UPK1AO00322 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.31■□□□□ 0.2
UPK1AO00322 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.31■□□□□ 0.2
UPK1AO00322 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
UPK1AO00322 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.31■□□□□ 0.2
UPK1AO00322 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.31■□□□□ 0.2
UPK1AO00322 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.31■□□□□ 0.2
UPK1AO00322 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK1AO00322 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK1AO00322 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK1AO00322 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
UPK1AO00322 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK1AO00322 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1AO00322 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UPK1AO00322 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1AO00322 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1AO00322 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.3■□□□□ 0.2
UPK1AO00322 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.3■□□□□ 0.2
UPK1AO00322 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.3■□□□□ 0.2
UPK1AO00322 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1AO00322 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1AO00322 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1AO00322 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1AO00322 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UPK1AO00322 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms