Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FAM220CP-201ENST00000395253 831 ntBASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RNPS1P1-201ENST00000507437 918 ntBASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ABCD1P5-201ENST00000445663 754 ntBASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FGFR3P6-201ENST00000457012 610 ntBASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AP001269.4-201ENST00000609611 512 ntBASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BX640515.1-201ENST00000617215 977 ntBASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC016396.2-201ENST00000562575 1417 ntBASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KRT8P47-201ENST00000604727 1398 ntBASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AP005117.1-201ENST00000584346 1413 ntBASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms