Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AP002414.3-201ENST00000589352 1468 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 KRT18P27-201ENST00000427733 1299 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC005104.2-201ENST00000427818 678 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 KRT18P3-201ENST00000451602 1288 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC092183.1-201ENST00000469884 875 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC040169.1-201ENST00000565382 521 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC006557.2-201ENST00000592985 1240 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 AC010460.3-201ENST00000511359 1579 ntBASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGA6Q9Y5G7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 COX5BP2-201ENST00000392354 334 ntBASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 AL355312.1-201ENST00000407115 2176 ntBASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA6Q9Y5G7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 SPDYE21P-201ENST00000413323 827 ntBASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 UPF3AP3-201ENST00000420996 769 ntBASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 BX005266.1-201ENST00000473402 457 ntBASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA6Q9Y5G7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms