Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 PRYP5-201ENST00000451909 266 ntBASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 AC093909.1-201ENST00000504731 1122 ntBASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 AC148477.8-201ENST00000624298 468 ntBASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CUEDC1Q9NWM3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 LINC00982-205ENST00000420957 435 ntBASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 BX842568.4-201ENST00000421222 227 ntBASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 OR6D1P-202ENST00000641007 5290 ntBASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CUEDC1Q9NWM3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 AC093525.9-201ENST00000624961 1746 ntBASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 RPS2P1-201ENST00000434010 821 ntBASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 AC073648.2-201ENST00000510116 352 ntBASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CUEDC1Q9NWM3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms