Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MIR935-201ENST00000401179 91 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 DDX43P3-201ENST00000441064 443 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC010240.3-201ENST00000607688 395 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC092364.2-201ENST00000596710 2692 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC024909.3-201ENST00000611513 2257 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AC009949.1-201ENST00000623048 1830 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 LINC00167-201ENST00000530583 1419 ntBASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AC016396.2-201ENST00000562575 1417 ntBASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 AC005786.4-201ENST00000623369 682 ntBASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP4Q9BWG4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms