Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.27■□□□□ 0.03
VRK1Q99986 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 UBALD1-205ENST00000590891 2641 ntBASIC15.27■□□□□ 0.03
VRK1Q99986 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VRK1Q99986 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VRK1Q99986 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 AL121761.2-201ENST00000598007 1648 ntBASIC15.26■□□□□ 0.03
VRK1Q99986 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VRK1Q99986 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 AC132008.2-207ENST00000454517 770 ntBASIC15.26■□□□□ 0.03
VRK1Q99986 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.26■□□□□ 0.03
VRK1Q99986 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.26■□□□□ 0.03
VRK1Q99986 AC112698.1-201ENST00000510299 916 ntBASIC15.26■□□□□ 0.03
VRK1Q99986 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.26■□□□□ 0.03
VRK1Q99986 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.26■□□□□ 0.03
VRK1Q99986 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.26■□□□□ 0.03
VRK1Q99986 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 AC104692.2-201ENST00000603054 253 ntBASIC15.26■□□□□ 0.03
VRK1Q99986 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VRK1Q99986 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
VRK1Q99986 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.26■□□□□ 0.03
VRK1Q99986 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK1Q99986 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VRK1Q99986 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
VRK1Q99986 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VRK1Q99986 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 AKR1C7P-201ENST00000305623 895 ntBASIC15.25■□□□□ 0.03
VRK1Q99986 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
VRK1Q99986 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.25■□□□□ 0.03
VRK1Q99986 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.25■□□□□ 0.03
VRK1Q99986 AF238378.1-201ENST00000526806 358 ntBASIC15.25■□□□□ 0.03
VRK1Q99986 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 AP002469.2-201ENST00000531724 424 ntBASIC15.25■□□□□ 0.03
VRK1Q99986 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK1Q99986 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK1Q99986 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms