Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NPAS2Q99743 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NPAS2Q99743 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NPAS2Q99743 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 KRT89P-201ENST00000620027 1478 ntBASIC16.89■□□□□ 0.29
NPAS2Q99743 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS2Q99743 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS2Q99743 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.89■□□□□ 0.29
NPAS2Q99743 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS2Q99743 MIR3652-201ENST00000579335 131 ntBASIC16.89■□□□□ 0.29
NPAS2Q99743 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.89■□□□□ 0.29
NPAS2Q99743 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NPAS2Q99743 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS2Q99743 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NPAS2Q99743 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.88■□□□□ 0.29
NPAS2Q99743 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS2Q99743 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.88■□□□□ 0.29
NPAS2Q99743 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NPAS2Q99743 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.88■□□□□ 0.29
NPAS2Q99743 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.88■□□□□ 0.29
NPAS2Q99743 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS2Q99743 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS2Q99743 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS2Q99743 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS2Q99743 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS2Q99743 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 RNF216P1-203ENST00000404404 2427 ntBASIC16.87■□□□□ 0.29
NPAS2Q99743 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS2Q99743 TOB2P1-201ENST00000469761 992 ntBASIC16.87■□□□□ 0.29
NPAS2Q99743 RN7SL606P-201ENST00000472779 293 ntBASIC16.87■□□□□ 0.29
NPAS2Q99743 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS2Q99743 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS2Q99743 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS2Q99743 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms