Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA3Q99618 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
CDCA3Q99618 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 LINC00304-203ENST00000565008 1864 ntBASIC17.73■□□□□ 0.43
CDCA3Q99618 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 CU639417.3-201ENST00000624240 1404 ntBASIC17.72■□□□□ 0.43
CDCA3Q99618 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CDCA3Q99618 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA3Q99618 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA3Q99618 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.72■□□□□ 0.43
CDCA3Q99618 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.72■□□□□ 0.43
CDCA3Q99618 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA3Q99618 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA3Q99618 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA3Q99618 AC007274.1-201ENST00000439805 662 ntBASIC17.72■□□□□ 0.43
CDCA3Q99618 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.72■□□□□ 0.43
CDCA3Q99618 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA3Q99618 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA3Q99618 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDCA3Q99618 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA3Q99618 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA3Q99618 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDCA3Q99618 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 SLC22A20-204ENST00000530038 1673 ntBASIC17.71■□□□□ 0.43
CDCA3Q99618 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CDCA3Q99618 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDCA3Q99618 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDCA3Q99618 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDCA3Q99618 AC142381.1-201ENST00000426099 345 ntBASIC17.71■□□□□ 0.43
CDCA3Q99618 SPTLC1P1-201ENST00000447199 261 ntBASIC17.71■□□□□ 0.43
CDCA3Q99618 KRT17P7-201ENST00000451704 1104 ntBASIC17.71■□□□□ 0.43
CDCA3Q99618 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCA3Q99618 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA3Q99618 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.71■□□□□ 0.43
CDCA3Q99618 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCA3Q99618 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA3Q99618 AC021097.1-201ENST00000607902 574 ntBASIC17.71■□□□□ 0.43
CDCA3Q99618 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCA3Q99618 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDCA3Q99618 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCA3Q99618 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCA3Q99618 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA3Q99618 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA3Q99618 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA3Q99618 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA3Q99618 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CDCA3Q99618 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.7■□□□□ 0.42
CDCA3Q99618 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCA3Q99618 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA3Q99618 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCA3Q99618 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA3Q99618 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.7■□□□□ 0.42
CDCA3Q99618 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.7■□□□□ 0.42
CDCA3Q99618 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA3Q99618 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA3Q99618 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA3Q99618 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA3Q99618 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDCA3Q99618 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 AC073389.1-201ENST00000595595 795 ntBASIC17.7■□□□□ 0.42
CDCA3Q99618 AC003101.2-201ENST00000612557 442 ntBASIC17.7■□□□□ 0.42
CDCA3Q99618 SPDYE12P-201ENST00000618416 771 ntBASIC17.7■□□□□ 0.42
CDCA3Q99618 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCA3Q99618 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCA3Q99618 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms