Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.43□□□□□ -0.1
CCL13Q99616 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.43□□□□□ -0.1
CCL13Q99616 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.43□□□□□ -0.1
CCL13Q99616 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 AC108860.2-201ENST00000562760 2183 ntBASIC14.43□□□□□ -0.1
CCL13Q99616 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL13Q99616 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCL13Q99616 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL13Q99616 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL13Q99616 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL13Q99616 ACTG1P4-201ENST00000425123 1122 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 AC018712.1-201ENST00000455767 687 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL13Q99616 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL13Q99616 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL13Q99616 AL773604.1-201ENST00000617417 272 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 AC107918.4-202ENST00000641623 219 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 AC116353.5-201ENST00000638148 1699 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 AC012313.1-201ENST00000593393 3059 ntBASIC14.42□□□□□ -0.1
CCL13Q99616 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL13Q99616 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCL13Q99616 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL13Q99616 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCL13Q99616 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCL13Q99616 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 RPS2P28-201ENST00000314255 741 ntBASIC14.41□□□□□ -0.1
CCL13Q99616 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL13Q99616 AL031284.1-201ENST00000419297 478 ntBASIC14.41□□□□□ -0.1
CCL13Q99616 AC026396.1-201ENST00000419388 421 ntBASIC14.41□□□□□ -0.1
CCL13Q99616 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL13Q99616 LAGE3P1-201ENST00000425356 484 ntBASIC14.41□□□□□ -0.1
CCL13Q99616 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL13Q99616 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL13Q99616 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CCL13Q99616 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms