Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
EYA3Q99504 MIR943-201ENST00000401286 94 ntBASIC20.78■□□□□ 0.92
EYA3Q99504 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.78■□□□□ 0.92
EYA3Q99504 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EYA3Q99504 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.78■□□□□ 0.92
EYA3Q99504 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.78■□□□□ 0.92
EYA3Q99504 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.78■□□□□ 0.92
EYA3Q99504 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EYA3Q99504 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.78■□□□□ 0.92
EYA3Q99504 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
EYA3Q99504 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EYA3Q99504 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 LINC00304-203ENST00000565008 1864 ntBASIC20.77■□□□□ 0.92
EYA3Q99504 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 AC135050.7-201ENST00000624508 2218 ntBASIC20.77■□□□□ 0.92
EYA3Q99504 LYSMD4-203ENST00000378904 2122 ntBASIC20.77■□□□□ 0.92
EYA3Q99504 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.77■□□□□ 0.92
EYA3Q99504 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.77■□□□□ 0.92
EYA3Q99504 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
EYA3Q99504 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 AC109635.5-201ENST00000533593 962 ntBASIC20.77■□□□□ 0.92
EYA3Q99504 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.77■□□□□ 0.92
EYA3Q99504 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EYA3Q99504 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.77■□□□□ 0.92
EYA3Q99504 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
EYA3Q99504 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.77■□□□□ 0.91
EYA3Q99504 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
EYA3Q99504 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EYA3Q99504 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EYA3Q99504 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.77■□□□□ 0.91
EYA3Q99504 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 AC107890.1-201ENST00000422478 521 ntBASIC20.76■□□□□ 0.91
EYA3Q99504 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 AC125807.1-201ENST00000483097 614 ntBASIC20.76■□□□□ 0.91
EYA3Q99504 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 LINC01225-203ENST00000563550 1244 ntBASIC20.76■□□□□ 0.91
EYA3Q99504 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.76■□□□□ 0.91
EYA3Q99504 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.76■□□□□ 0.91
EYA3Q99504 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.76■□□□□ 0.91
EYA3Q99504 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 UXT-AS1-201ENST00000590504 1525 ntBASIC20.76■□□□□ 0.91
EYA3Q99504 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EYA3Q99504 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EYA3Q99504 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.76■□□□□ 0.91
EYA3Q99504 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.75■□□□□ 0.91
EYA3Q99504 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.75■□□□□ 0.91
EYA3Q99504 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.75■□□□□ 0.91
EYA3Q99504 SPDYE7P-202ENST00000420373 878 ntBASIC20.75■□□□□ 0.91
EYA3Q99504 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.75■□□□□ 0.91
EYA3Q99504 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EYA3Q99504 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
EYA3Q99504 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms