Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.23■□□□□ 0.51
CALR3Q96L12 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 AL845331.1-201ENST00000424978 1190 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.23■□□□□ 0.51
CALR3Q96L12 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AL136038.3-201ENST00000561909 1096 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC011498.5-201ENST00000592027 486 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 AC011467.2-201ENST00000598425 242 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 OR6D1P-203ENST00000641209 4860 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CALR3Q96L12 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.23■□□□□ 0.51
CALR3Q96L12 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC092850.2-201ENST00000623821 2697 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 FRMD8P1-201ENST00000440433 1524 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CALR3Q96L12 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 C8orf49-201ENST00000525043 1968 ntBASIC18.22■□□□□ 0.51
CALR3Q96L12 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 PCDH8P1-201ENST00000428983 2773 ntBASIC18.22■□□□□ 0.51
CALR3Q96L12 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CALR3Q96L12 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.22■□□□□ 0.51
CALR3Q96L12 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.22■□□□□ 0.51
CALR3Q96L12 AC022616.7-201ENST00000525383 220 ntBASIC18.22■□□□□ 0.51
CALR3Q96L12 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 LINC01023-201ENST00000606054 436 ntBASIC18.22■□□□□ 0.51
CALR3Q96L12 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.22■□□□□ 0.51
CALR3Q96L12 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CALR3Q96L12 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.22■□□□□ 0.51
CALR3Q96L12 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CALR3Q96L12 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CALR3Q96L12 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.22■□□□□ 0.51
CALR3Q96L12 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CALR3Q96L12 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.21■□□□□ 0.51
CALR3Q96L12 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CALR3Q96L12 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 KRT18P57-201ENST00000443599 1254 ntBASIC18.21■□□□□ 0.51
CALR3Q96L12 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.21■□□□□ 0.51
CALR3Q96L12 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CALR3Q96L12 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CALR3Q96L12 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CALR3Q96L12 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms