Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 IL9RP2-201ENST00000423948 1312 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 BX276092.7-203ENST00000637198 1536 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF183Q96D59 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 FLJ38576-201ENST00000623820 2459 ntBASIC12.81□□□□□ -0.36
RNF183Q96D59 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RNF183Q96D59 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF183Q96D59 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RNF183Q96D59 HNRNPDP1-201ENST00000439535 754 ntBASIC12.81□□□□□ -0.36
RNF183Q96D59 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF183Q96D59 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.81□□□□□ -0.36
RNF183Q96D59 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 MTDHP4-201ENST00000600287 670 ntBASIC12.81□□□□□ -0.36
RNF183Q96D59 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RNF183Q96D59 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF183Q96D59 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RNF183Q96D59 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
RNF183Q96D59 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RNF183Q96D59 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
RNF183Q96D59 PKD1P5-201ENST00000532415 10291 ntBASIC12.81□□□□□ -0.36
RNF183Q96D59 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF183Q96D59 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms