Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 MRPS18AP1-201ENST00000414458 589 ntBASIC21.81■■□□□ 1.08
SMARCC1Q92922 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.81■■□□□ 1.08
SMARCC1Q92922 AL662799.1-202ENST00000614205 422 ntBASIC21.81■■□□□ 1.08
SMARCC1Q92922 AC073592.8-201ENST00000624126 511 ntBASIC21.81■■□□□ 1.08
SMARCC1Q92922 AC025048.6-201ENST00000634326 1161 ntBASIC21.81■■□□□ 1.08
SMARCC1Q92922 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC1Q92922 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SMARCC1Q92922 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 LYSMD4-203ENST00000378904 2122 ntBASIC21.8■■□□□ 1.08
SMARCC1Q92922 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC1Q92922 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC1Q92922 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 AL590560.3-201ENST00000623350 461 ntBASIC21.79■■□□□ 1.08
SMARCC1Q92922 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 LINC00304-203ENST00000565008 1864 ntBASIC21.79■■□□□ 1.08
SMARCC1Q92922 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC1Q92922 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC1Q92922 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC1Q92922 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCC1Q92922 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms