Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 AC005915.1-201ENST00000624912 2018 ntBASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 KRT18P67-201ENST00000432816 1264 ntBASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 SART3-203ENST00000546611 1184 ntBASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 AC084018.2-201ENST00000613093 2607 ntBASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 RNPS1P1-201ENST00000507437 918 ntBASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 AL773604.1-201ENST00000617417 272 ntBASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 AL139288.1-201ENST00000623748 933 ntBASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 AC148477.5-201ENST00000625164 1645 ntBASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMARCC2Q8TAQ2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.14■□□□□ 0.82
SMARCC2Q8TAQ2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMARCC2Q8TAQ2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.14■□□□□ 0.82
SMARCC2Q8TAQ2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC079776.4-201ENST00000511039 504 ntBASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 NKAPP1-205ENST00000585790 367 ntBASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AC148477.8-201ENST00000624298 468 ntBASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.14■□□□□ 0.81
SMARCC2Q8TAQ2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms