Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 RBM17P3-201ENST00000417687 1192 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 SAPCD2P3-201ENST00000455031 850 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 AC073592.4-201ENST00000623827 446 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 AC073592.5-201ENST00000624854 528 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 AC018695.7-201ENST00000624587 2492 ntBASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf42Q8N5U0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 LYSMD4-203ENST00000378904 2122 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 FGFR3P6-201ENST00000457012 610 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 IGHV3-52-201ENST00000519770 353 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 MTDHP3-201ENST00000594186 672 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 AL139327.4-201ENST00000612362 153 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 SIGLEC16-201ENST00000599858 1437 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 PCDHA12-202ENST00000613593 2588 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 CICP6-201ENST00000457191 2729 ntBASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf42Q8N5U0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 AL162727.3-201ENST00000635661 2787 ntBASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf42Q8N5U0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms