Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 MKNK2P1-201ENST00000437526 628 ntBASIC19.15■□□□□ 0.66
TRIM50Q86XT4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 AC074386.1-202ENST00000463561 864 ntBASIC19.15■□□□□ 0.66
TRIM50Q86XT4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM50Q86XT4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM50Q86XT4 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.14■□□□□ 0.66
TRIM50Q86XT4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM50Q86XT4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SLC25A6P5-201ENST00000435663 894 ntBASIC19.14■□□□□ 0.65
TRIM50Q86XT4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SNHG9-202ENST00000564014 471 ntBASIC19.14■□□□□ 0.65
TRIM50Q86XT4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM50Q86XT4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 AL513480.1-201ENST00000451731 511 ntBASIC19.13■□□□□ 0.65
TRIM50Q86XT4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 AC027796.2-201ENST00000575326 344 ntBASIC19.13■□□□□ 0.65
TRIM50Q86XT4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 AC007064.4-201ENST00000637740 555 ntBASIC19.13■□□□□ 0.65
TRIM50Q86XT4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM50Q86XT4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 METTL21AP1-201ENST00000438852 635 ntBASIC19.12■□□□□ 0.65
TRIM50Q86XT4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 AC107918.2-201ENST00000530817 355 ntBASIC19.12■□□□□ 0.65
TRIM50Q86XT4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM50Q86XT4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms