Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SGO1Q5FBB7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 AC233702.3-201ENST00000578656 1387 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 AC246785.2-201ENST00000432512 513 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 TOB2P1-201ENST00000469761 992 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 AP002414.4-201ENST00000589764 1148 ntBASIC16.77■□□□□ 0.28
SGO1Q5FBB7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
SGO1Q5FBB7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SGO1Q5FBB7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.77■□□□□ 0.27
SGO1Q5FBB7 AC005915.1-201ENST00000624912 2018 ntBASIC16.77■□□□□ 0.27
SGO1Q5FBB7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SGO1Q5FBB7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SGO1Q5FBB7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.76■□□□□ 0.27
SGO1Q5FBB7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.76■□□□□ 0.27
SGO1Q5FBB7 AP002383.4-201ENST00000442518 975 ntBASIC16.76■□□□□ 0.27
SGO1Q5FBB7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
SGO1Q5FBB7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.76■□□□□ 0.27
SGO1Q5FBB7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SGO1Q5FBB7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms