Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AL031284.1-201ENST00000419297 478 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 POLD2P1-201ENST00000511220 997 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AF238378.1-201ENST00000526806 358 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC010240.3-201ENST00000607688 395 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHRFAM7AQ494W8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 NSUN5P1-202ENST00000421140 1535 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 NSUN5P2-203ENST00000457352 1529 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 KRT18P67-201ENST00000432816 1264 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 DUTP2-201ENST00000519164 463 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 AL592071.1-201ENST00000611956 408 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 AC022898.2-201ENST00000616822 1312 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms