Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
HLA-BQ31612 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-BQ31612 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-BQ31612 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-BQ31612 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-BQ31612 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-BQ31612 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-BQ31612 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 AC005225.4-201ENST00000557330 545 ntBASIC16.6■□□□□ 0.25
HLA-BQ31612 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-BQ31612 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-BQ31612 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-BQ31612 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-BQ31612 LYSMD4-203ENST00000378904 2122 ntBASIC16.6■□□□□ 0.25
HLA-BQ31612 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-BQ31612 AC098818.2-201ENST00000564925 2320 ntBASIC16.59■□□□□ 0.25
HLA-BQ31612 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-BQ31612 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-BQ31612 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-BQ31612 FAM207CP-201ENST00000443486 507 ntBASIC16.59■□□□□ 0.25
HLA-BQ31612 AC109635.5-201ENST00000533593 962 ntBASIC16.59■□□□□ 0.25
HLA-BQ31612 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.59■□□□□ 0.25
HLA-BQ31612 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 AC008761.3-201ENST00000624803 892 ntBASIC16.59■□□□□ 0.25
HLA-BQ31612 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-BQ31612 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-BQ31612 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-BQ31612 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-BQ31612 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HLA-BQ31612 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-BQ31612 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.58■□□□□ 0.25
HLA-BQ31612 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-BQ31612 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-BQ31612 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HLA-BQ31612 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 AC069120.2-201ENST00000524091 540 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-BQ31612 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 AL158211.3-201ENST00000607385 239 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 MIR6080-201ENST00000617359 66 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 WASH6P-202ENST00000359512 1437 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-BQ31612 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 AL353732.1-201ENST00000569618 1459 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 BX323043.1-201ENST00000641006 1765 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-BQ31612 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 AC087289.5-201ENST00000586076 3175 ntBASIC16.58■□□□□ 0.24
HLA-BQ31612 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-BQ31612 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-BQ31612 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms