Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.17■□□□□ 0.98
DDR1Q08345 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 AP000974.1-201ENST00000623909 2387 ntBASIC21.17■□□□□ 0.98
DDR1Q08345 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.17■□□□□ 0.98
DDR1Q08345 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.16■□□□□ 0.98
DDR1Q08345 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.16■□□□□ 0.98
DDR1Q08345 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
DDR1Q08345 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.16■□□□□ 0.98
DDR1Q08345 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 ATP5G2P4-201ENST00000442175 420 ntBASIC21.16■□□□□ 0.98
DDR1Q08345 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 LETM1P2-201ENST00000597330 2178 ntBASIC21.16■□□□□ 0.98
DDR1Q08345 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.16■□□□□ 0.98
DDR1Q08345 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDR1Q08345 LINC00304-203ENST00000565008 1864 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.15■□□□□ 0.98
DDR1Q08345 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.15■□□□□ 0.98
DDR1Q08345 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.15■□□□□ 0.98
DDR1Q08345 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.15■□□□□ 0.98
DDR1Q08345 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 RARRES2P9-201ENST00000565168 469 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 MIR3909-201ENST00000579518 119 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.15■□□□□ 0.98
DDR1Q08345 AC018529.1-201ENST00000613063 361 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDR1Q08345 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.15■□□□□ 0.98
DDR1Q08345 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.15■□□□□ 0.98
DDR1Q08345 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 AC026471.1-201ENST00000564629 3026 ntBASIC21.15■□□□□ 0.98
DDR1Q08345 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDR1Q08345 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.15■□□□□ 0.98
DDR1Q08345 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
DDR1Q08345 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
DDR1Q08345 CU639417.3-201ENST00000624240 1404 ntBASIC21.14■□□□□ 0.98
DDR1Q08345 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDR1Q08345 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
DDR1Q08345 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.14■□□□□ 0.98
DDR1Q08345 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDR1Q08345 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 AC009477.1-201ENST00000452936 217 ntBASIC21.14■□□□□ 0.97
DDR1Q08345 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.14■□□□□ 0.97
DDR1Q08345 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.14■□□□□ 0.97
DDR1Q08345 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.14■□□□□ 0.97
DDR1Q08345 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.14■□□□□ 0.97
DDR1Q08345 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.14■□□□□ 0.97
DDR1Q08345 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DDR1Q08345 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.14■□□□□ 0.97
DDR1Q08345 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDR1Q08345 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.13■□□□□ 0.97
DDR1Q08345 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DDR1Q08345 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.13■□□□□ 0.97
DDR1Q08345 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DDR1Q08345 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.13■□□□□ 0.97
DDR1Q08345 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.13■□□□□ 0.97
DDR1Q08345 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.13■□□□□ 0.97
DDR1Q08345 AC009407.1-201ENST00000568958 598 ntBASIC21.13■□□□□ 0.97
DDR1Q08345 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.13■□□□□ 0.97
DDR1Q08345 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms