Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.25□□□□□ -0.29
HIST1H1AQ02539 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1AQ02539 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 BX276092.7-203ENST00000637198 1536 ntBASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 LINC01311-201ENST00000565162 1445 ntBASIC13.24□□□□□ -0.29
HIST1H1AQ02539 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 REXO1L11P-201ENST00000620964 1927 ntBASIC13.24□□□□□ -0.29
HIST1H1AQ02539 HBZP1-201ENST00000354915 429 ntBASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.24□□□□□ -0.29
HIST1H1AQ02539 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H1AQ02539 LINC00554-201ENST00000564841 3011 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 TSPY26P-202ENST00000565928 3884 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 AC126755.1-201ENST00000525846 6405 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 MIR662-201ENST00000384847 95 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 VENTXP5-201ENST00000523979 775 ntBASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST1H1AQ02539 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms